Even if we try to check the files for viruses, we cannot guarantee that they are safe and clean. Finds translationally silent restriction sitesĪpE (A Plasmid Editor) Free Download Information: Free Download 64 is not responsible for software you are downloading nor for details provided about the software 'ApE (A Plasmid Editor) 2.0.30 Alpha' listed here, as the developer can modify information without notifying us. Aligns two DNA sequences (or any combination of sequence and ABI trace), with the alignment hyperlinked to the original sequenceĦ. Finds potential primers matching user criteria (length, Tm, %GC, self/other complementarity)ĥ. Translates sequences with optional DNA alignmentĤ. * Graphic maps that show primer binding sites and all interesting sequence features3. * Sequence to be annotated and visualized in multiple ways quickly and efficiently * Quick searching and highlighting of all available primers that you (or others) have that hybridize to a sequence Uses custom feature definition libraries, which allow: Most analysis windows are hyperlinked to their corresponding sequences, includes: Imports DNA Strider format files (simple enzyme, site lists) available from REBASEOther Features:ġ. Allows users to define new enzymes by name and recognition siteĢ4. Has user defined enzyme grouping to distiguish eg. Selects sites that cut more often in one sequence than another (for snip-SNP detection or diagnostic digests)Ģ2. Selects sites matching multiple criteria (union/intersection- cut frequency, site type) in all open windowsĢ1. Sequences in ABI traces can be aligned directly to a reference sequence, with the alignment hyperlinked back to te trace.Ģ0. Connects bands to text by double-clickġ9. Draws pre-defined and user-defined DNA laddersġ7. Copy and save graphics as Windows metafiles (MS Windows only)ġ6. Saves graphics as encapsulated postscript or scalable vector graphicsġ4. Connects graphic and text features with hyperlink double clickġ3. Creates graphic restriction maps- linear or circular with features indicatedġ2.
Text map shows DNA sequence, translation, and features as text-based graphicsġ1. Directly BLASTs selected sequence at NCBI or wormbaseġ0. Highlights and draws graphic maps using feature annotations from genbank and embl filesĩ. Saves files as DNA Strider-compatible or Genbank file formatĨ. Reads DNA Strider, Fasta, Genbank and EMBL filesħ. Shows translation, Tm, %GC, ORF of selected DNA in real-timeĦ. Highlights text using pre-defined and custom feature librariesĥ. Accurately reflects Dam/Dcm blocking of enzyme sitesĤ. Highlights restriction sites in the editing windowģ. ApE was developed to be a small, easy-to-use plasmid editor.ġ. ApE is a small, easy-to-use plasmid editor.
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